基因组组装算法
目前,构建Graph的主流方法有3种,Overlap-Layout-Consensus(Celera Assembler、PBcR),de Bruijn Graph(SOAPdenovo ) 和 String Graph(Falcon)。 相关文献 基于De Bruijn图的宏基因组序列组装算法...
het smooth 组装高杂合度二倍体基因组前期数据处理
http://sourceforge.net/projects/het-smooth/equencing technologies, such as Illumina sequencing, provide the sequences ofshort "reads" of DNA that come...
用单分子测序(single-molecule sequencing)和局部敏感哈希(locality-sensitive hashing)来组装大型基因组
Assembling large genomes with single-molecule sequencing and locality-sensitive hashing好好读读,算法系列的好文章!Assembling large genomes with single-molecule seq...
基因组测序从头组装
冒然在这里做个文献总结,对于初入此道的朋友可能会有些帮助。以动物为例先推荐几本书,作为参考:1. Genome Sequencing Technology and Algorithms2. The handbook of plant genome mapping: genetic and physi...