In a blog post by Pierre Lindenbaum, srun is called within a Makefile to run jobs. I rely on this technique, but it makes no use of sbatch at all, so I am missing the chance to set sbatch-like environment variables. Where can I put the following so SLURM knows what to do?
在Pierre Lindenbaum的博客文章中，srun在Makefile中被调用来运行作业。我依赖这项技术，但是它根本不使用sbatch，所以我错过了设置像sbatch一样的环境变量的机会。我可以把下面的东西放在哪里，让思玛知道该怎么做?
#SBATCH -J testing
#SBATCH -A account
#SBATCH --time=1:00:00
#SBATCH --cpus-per-task=1
#SBATCH --begin=now
#SBATCH --mem=1G
#SBATCH -C sb
1 个解决方案
#1
2
The srun command accepts nearly all of the sbatch parameters (with the notable exception of --array). In the referred blog post, these arguments are set at the line:
srun命令接受几乎所有的sbatch参数(值得注意的例外是——array)。在引用的博客文章中，这些参数设置在一行:
.SHELLFLAGS= -N1 -n1 bash -c
so you would write
所以你会写
.SHELLFLAGS= -J testing -A account --time=1:00:00 --cpus-per-task --begin=now --mem=1G -C sb bash -c
Note that if you specify --cpu-per-task=1, and you keep the default of one tasks, it probably means that nodes are shared in your setup ; in that case, --mem-per-cpu=1G makes more sense than --mem=1G
注意，如果您指定——cpu-per-task=1，并且保留一个任务的默认值，这可能意味着在您的设置*享节点;在这种情况下，-每cpu内存=1G比-mem=1G更有意义
#1
2
The srun command accepts nearly all of the sbatch parameters (with the notable exception of --array). In the referred blog post, these arguments are set at the line:
srun命令接受几乎所有的sbatch参数(值得注意的例外是——array)。在引用的博客文章中，这些参数设置在一行:
.SHELLFLAGS= -N1 -n1 bash -c
so you would write
所以你会写
.SHELLFLAGS= -J testing -A account --time=1:00:00 --cpus-per-task --begin=now --mem=1G -C sb bash -c
Note that if you specify --cpu-per-task=1, and you keep the default of one tasks, it probably means that nodes are shared in your setup ; in that case, --mem-per-cpu=1G makes more sense than --mem=1G
注意，如果您指定——cpu-per-task=1，并且保留一个任务的默认值，这可能意味着在您的设置*享节点;在这种情况下，-每cpu内存=1G比-mem=1G更有意义